Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chchd1Q9CQA6 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chchd1Q9CQA6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Chchd1Q9CQA6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Chchd1Q9CQA6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Chchd1Q9CQA6 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.64□□□□□ -0.87
Chchd1Q9CQA6 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Chchd1Q9CQA6 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Chchd1Q9CQA6 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Chchd1Q9CQA6 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Chchd1Q9CQA6 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Chchd1Q9CQA6 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms