Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.62□□□□□ -0.55
Krt88Q9CPR6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Krt88Q9CPR6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.62□□□□□ -0.55
Krt88Q9CPR6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Krt88Q9CPR6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Krt88Q9CPR6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Krt88Q9CPR6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Krt88Q9CPR6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Krt88Q9CPR6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Krt88Q9CPR6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.62□□□□□ -0.55
Krt88Q9CPR6 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.62□□□□□ -0.55
Krt88Q9CPR6 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.62□□□□□ -0.55
Krt88Q9CPR6 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.62□□□□□ -0.55
Krt88Q9CPR6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Krt88Q9CPR6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Krt88Q9CPR6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Gm14767-201ENSMUST00000121559 586 ntBASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Krt88Q9CPR6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Paupar-201ENSMUST00000194826 3482 ntBASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Gm13616-201ENSMUST00000120600 222 ntBASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Gm27321-201ENSMUST00000185021 205 ntBASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Gm10576-201ENSMUST00000191927 825 ntBASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Gm44124-201ENSMUST00000204159 472 ntBASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Krt88Q9CPR6 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms