Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim8Q99PJ2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim8Q99PJ2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim8Q99PJ2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Gm38144-201ENSMUST00000192790 465 ntBASIC12.64□□□□□ -0.39
Trim8Q99PJ2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim8Q99PJ2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Gm5866-201ENSMUST00000177881 973 ntBASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim8Q99PJ2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Gm2423-201ENSMUST00000074863 733 ntBASIC12.62□□□□□ -0.39
Trim8Q99PJ2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms