Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.91■□□□□ 0.3
Rtn4Q99P72 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.91■□□□□ 0.3
Rtn4Q99P72 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Gm16149-201ENSMUST00000117631 309 ntBASIC16.91■□□□□ 0.3
Rtn4Q99P72 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Gm27847-201ENSMUST00000183711 107 ntBASIC16.91■□□□□ 0.3
Rtn4Q99P72 Gm27375-201ENSMUST00000183799 107 ntBASIC16.91■□□□□ 0.3
Rtn4Q99P72 AY702102-202ENSMUST00000194651 1173 ntBASIC16.91■□□□□ 0.3
Rtn4Q99P72 Gm42550-201ENSMUST00000201553 960 ntBASIC16.91■□□□□ 0.3
Rtn4Q99P72 Gm7287-201ENSMUST00000205267 602 ntBASIC16.91■□□□□ 0.3
Rtn4Q99P72 Gm6983-201ENSMUST00000214912 628 ntBASIC16.91■□□□□ 0.3
Rtn4Q99P72 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC16.91■□□□□ 0.3
Rtn4Q99P72 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rtn4Q99P72 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.9■□□□□ 0.3
Rtn4Q99P72 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Gm12742-201ENSMUST00000117326 410 ntBASIC16.9■□□□□ 0.3
Rtn4Q99P72 Gm12957-201ENSMUST00000117835 377 ntBASIC16.9■□□□□ 0.3
Rtn4Q99P72 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rtn4Q99P72 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Gm21301-201ENSMUST00000189476 699 ntBASIC16.9■□□□□ 0.3
Rtn4Q99P72 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.9■□□□□ 0.3
Rtn4Q99P72 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Gm6091-201ENSMUST00000098307 165 ntBASIC16.9■□□□□ 0.3
Rtn4Q99P72 Gm10617-201ENSMUST00000098368 1172 ntBASIC16.9■□□□□ 0.3
Rtn4Q99P72 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Gm27196-201ENSMUST00000184787 2582 ntBASIC16.9■□□□□ 0.3
Rtn4Q99P72 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Gm6655-201ENSMUST00000201932 1309 ntBASIC16.9■□□□□ 0.3
Rtn4Q99P72 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rtn4Q99P72 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn4Q99P72 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.89■□□□□ 0.29
Rtn4Q99P72 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm14957-201ENSMUST00000121069 817 ntBASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rtn4Q99P72 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms