Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Gm4862-201ENSMUST00000170405 438 ntBASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Gm6722-201ENSMUST00000221586 390 ntBASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Gm5513-201ENSMUST00000072982 1218 ntBASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col25a1Q99MQ5 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col25a1Q99MQ5 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.33□□□□□ -0.27
Col25a1Q99MQ5 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.33□□□□□ -0.27
Col25a1Q99MQ5 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col25a1Q99MQ5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col25a1Q99MQ5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col25a1Q99MQ5 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Col25a1Q99MQ5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Gm11354-201ENSMUST00000121974 422 ntBASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Mir6998-201ENSMUST00000183343 64 ntBASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Gm8712-201ENSMUST00000221090 701 ntBASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Col25a1Q99MQ5 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Matn2-206ENSMUST00000228570 2798 ntBASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC13.32□□□□□ -0.28
Col25a1Q99MQ5 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms