Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Gm6745-201ENSMUST00000199216 526 ntBASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf111Q99ML9 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.49□□□□□ -0.41
Rnf111Q99ML9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Gm44397-201ENSMUST00000195950 113 ntBASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf111Q99ML9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.48□□□□□ -0.41
Rnf111Q99ML9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms