Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.09□□□□□ -0.47
Nkx6-1Q99MA9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Nkx6-1Q99MA9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx6-1Q99MA9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx6-1Q99MA9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Gm13296-201ENSMUST00000117854 997 ntBASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Gm9211-201ENSMUST00000182882 975 ntBASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx6-1Q99MA9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Gm14665-201ENSMUST00000122294 557 ntBASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Gm20614-201ENSMUST00000177106 632 ntBASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Gm7593-201ENSMUST00000187246 644 ntBASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Gzmn-202ENSMUST00000225535 989 ntBASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Spcs1-203ENSMUST00000226374 592 ntBASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nkx6-1Q99MA9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms