Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Gm38158-201ENSMUST00000194617 339 ntBASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Gm43179-201ENSMUST00000198797 275 ntBASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Gm5781-201ENSMUST00000219792 443 ntBASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Olfr582-201ENSMUST00000098212 960 ntBASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lysmd3Q99LE3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Mir8109-201ENSMUST00000184375 117 ntBASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Gm8099-201ENSMUST00000200510 742 ntBASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Olfr284-202ENSMUST00000206647 966 ntBASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lysmd3Q99LE3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Gm29396-201ENSMUST00000185659 716 ntBASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Gm18935-201ENSMUST00000212692 664 ntBASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lysmd3Q99LE3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms