Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Gm5279-201ENSMUST00000199575 745 ntBASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Gm9063-201ENSMUST00000223299 582 ntBASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Thumpd1Q99J36 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Daam2-202ENSMUST00000224595 1926 ntBASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Mir686-201ENSMUST00000102174 109 ntBASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Gm13813-201ENSMUST00000120998 787 ntBASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Gm15376-201ENSMUST00000122258 783 ntBASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Gm11978-201ENSMUST00000122315 466 ntBASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Gm22175-201ENSMUST00000175007 78 ntBASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thumpd1Q99J36 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Thumpd1Q99J36 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms