Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha9Q91Y11 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha9Q91Y11 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha9Q91Y11 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha9Q91Y11 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha9Q91Y11 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha9Q91Y11 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha9Q91Y11 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdha9Q91Y11 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Pcdha9Q91Y11 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Gm11591-201ENSMUST00000120063 702 ntBASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Gm25261-201ENSMUST00000157416 134 ntBASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Gm16379-201ENSMUST00000161469 348 ntBASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Gm27514-201ENSMUST00000183692 110 ntBASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Gm8762-201ENSMUST00000193486 339 ntBASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdha9Q91Y11 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Gm18584-201ENSMUST00000203098 964 ntBASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Gm24526-201ENSMUST00000082921 158 ntBASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdha9Q91Y11 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Gm14127-201ENSMUST00000117906 678 ntBASIC13.65□□□□□ -0.22
Pcdha9Q91Y11 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms