Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Gm13813-201ENSMUST00000120998 787 ntBASIC14.71□□□□□ -0.05
Trex1Q91XB0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trex1Q91XB0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Trex1Q91XB0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trex1Q91XB0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
Trex1Q91XB0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.7□□□□□ -0.06
Trex1Q91XB0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.7□□□□□ -0.06
Trex1Q91XB0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.7□□□□□ -0.06
Trex1Q91XB0 Gm14208-201ENSMUST00000119645 678 ntBASIC14.7□□□□□ -0.06
Trex1Q91XB0 Gm14277-201ENSMUST00000121195 360 ntBASIC14.7□□□□□ -0.06
Trex1Q91XB0 Gm26361-201ENSMUST00000158868 186 ntBASIC14.7□□□□□ -0.06
Trex1Q91XB0 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.7□□□□□ -0.06
Trex1Q91XB0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Gm44262-201ENSMUST00000204969 372 ntBASIC14.7□□□□□ -0.06
Trex1Q91XB0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.7□□□□□ -0.06
Trex1Q91XB0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trex1Q91XB0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Gm14999-201ENSMUST00000121039 624 ntBASIC14.69□□□□□ -0.06
Trex1Q91XB0 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Gm24845-201ENSMUST00000158034 109 ntBASIC14.69□□□□□ -0.06
Trex1Q91XB0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Gm27023-201ENSMUST00000182372 285 ntBASIC14.69□□□□□ -0.06
Trex1Q91XB0 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trex1Q91XB0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms