Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usb1Q91W78 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.78□□□□□ -0.36
Usb1Q91W78 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Usb1Q91W78 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usb1Q91W78 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usb1Q91W78 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usb1Q91W78 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usb1Q91W78 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Usb1Q91W78 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usb1Q91W78 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usb1Q91W78 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usb1Q91W78 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Usb1Q91W78 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usb1Q91W78 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usb1Q91W78 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usb1Q91W78 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usb1Q91W78 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.77□□□□□ -0.36
Usb1Q91W78 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Usb1Q91W78 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 Mir874-201ENSMUST00000104769 76 ntBASIC12.77□□□□□ -0.37
Usb1Q91W78 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.77□□□□□ -0.37
Usb1Q91W78 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.77□□□□□ -0.37
Usb1Q91W78 Gm22331-201ENSMUST00000158066 136 ntBASIC12.77□□□□□ -0.37
Usb1Q91W78 Snora78-201ENSMUST00000158630 128 ntBASIC12.77□□□□□ -0.37
Usb1Q91W78 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.77□□□□□ -0.37
Usb1Q91W78 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.77□□□□□ -0.37
Usb1Q91W78 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.77□□□□□ -0.37
Usb1Q91W78 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.77□□□□□ -0.37
Usb1Q91W78 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.77□□□□□ -0.37
Usb1Q91W78 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.77□□□□□ -0.37
Usb1Q91W78 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Usb1Q91W78 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usb1Q91W78 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Usb1Q91W78 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Usb1Q91W78 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Usb1Q91W78 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Usb1Q91W78 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Usb1Q91W78 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Usb1Q91W78 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Usb1Q91W78 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Gm12742-201ENSMUST00000117326 410 ntBASIC12.76□□□□□ -0.37
Usb1Q91W78 Gm11803-201ENSMUST00000119966 444 ntBASIC12.76□□□□□ -0.37
Usb1Q91W78 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Usb1Q91W78 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Proscos-202ENSMUST00000178990 666 ntBASIC12.76□□□□□ -0.37
Usb1Q91W78 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.76□□□□□ -0.37
Usb1Q91W78 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.76□□□□□ -0.37
Usb1Q91W78 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Usb1Q91W78 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.76□□□□□ -0.37
Usb1Q91W78 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.76□□□□□ -0.37
Usb1Q91W78 Gm8598-201ENSMUST00000221184 836 ntBASIC12.76□□□□□ -0.37
Usb1Q91W78 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Usb1Q91W78 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Usb1Q91W78 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Usb1Q91W78 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usb1Q91W78 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms