Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb11Q91UZ8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb11Q91UZ8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb11Q91UZ8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb11Q91UZ8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhb11Q91UZ8 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhb11Q91UZ8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb11Q91UZ8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhb11Q91UZ8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhb11Q91UZ8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Gm27731-201ENSMUST00000185192 107 ntBASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Gm45784-201ENSMUST00000188360 142 ntBASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Gm19163-201ENSMUST00000223313 780 ntBASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhb11Q91UZ8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Gm12384-201ENSMUST00000119228 919 ntBASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Gm11425-201ENSMUST00000119608 498 ntBASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Gm4768-201ENSMUST00000206199 686 ntBASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Gm32025-201ENSMUST00000217960 307 ntBASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Gm9396-201ENSMUST00000076703 567 ntBASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb11Q91UZ8 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb11Q91UZ8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb11Q91UZ8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb11Q91UZ8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb11Q91UZ8 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.17□□□□□ -0.3
Pcdhb11Q91UZ8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb11Q91UZ8 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms