Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rpa1Q8VEE4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Gm27430-201ENSMUST00000184585 107 ntBASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Gm44333-201ENSMUST00000197168 107 ntBASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 AC154634.3-201ENSMUST00000224589 736 ntBASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rpa1Q8VEE4 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Gm42690-201ENSMUST00000197921 1836 ntBASIC13□□□□□ -0.33
Rpa1Q8VEE4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Gm45484-201ENSMUST00000210310 1141 ntBASIC13□□□□□ -0.33
Rpa1Q8VEE4 Gm45574-201ENSMUST00000210921 331 ntBASIC13□□□□□ -0.33
Rpa1Q8VEE4 Gm17870-201ENSMUST00000219489 1174 ntBASIC13□□□□□ -0.33
Rpa1Q8VEE4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms