Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q8VDP2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q8VDP2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.54□□□□□ -0.4
Q8VDP2 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.54□□□□□ -0.4
Q8VDP2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q8VDP2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Q8VDP2 Gm9682-201ENSMUST00000197505 556 ntBASIC12.54□□□□□ -0.4
Q8VDP2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Q8VDP2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q8VDP2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Q8VDP2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Q8VDP2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Q8VDP2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Q8VDP2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.54□□□□□ -0.4
Q8VDP2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q8VDP2 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q8VDP2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q8VDP2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q8VDP2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Q8VDP2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Q8VDP2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.53□□□□□ -0.4
Q8VDP2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Q8VDP2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Q8VDP2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.53□□□□□ -0.4
Q8VDP2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Q8VDP2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.53□□□□□ -0.4
Q8VDP2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.53□□□□□ -0.4
Q8VDP2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.53□□□□□ -0.4
Q8VDP2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Q8VDP2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.53□□□□□ -0.4
Q8VDP2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.53□□□□□ -0.4
Q8VDP2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.53□□□□□ -0.4
Q8VDP2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.53□□□□□ -0.4
Q8VDP2 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Q8VDP2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Q8VDP2 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.53□□□□□ -0.4
Q8VDP2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Q8VDP2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Q8VDP2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Q8VDP2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Q8VDP2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Q8VDP2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Q8VDP2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Q8VDP2 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Q8VDP2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Q8VDP2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Q8VDP2 Gm23935-201ENSMUST00000102303 57 ntBASIC12.52□□□□□ -0.41
Q8VDP2 Gm24270-201ENSMUST00000102326 57 ntBASIC12.52□□□□□ -0.41
Q8VDP2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.52□□□□□ -0.41
Q8VDP2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.52□□□□□ -0.41
Q8VDP2 Gm24245-201ENSMUST00000157318 57 ntBASIC12.52□□□□□ -0.41
Q8VDP2 Gm26308-201ENSMUST00000157768 69 ntBASIC12.52□□□□□ -0.41
Q8VDP2 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.52□□□□□ -0.41
Q8VDP2 Gm7063-201ENSMUST00000186840 981 ntBASIC12.52□□□□□ -0.41
Q8VDP2 Gm35960-201ENSMUST00000202712 767 ntBASIC12.52□□□□□ -0.41
Q8VDP2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Q8VDP2 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Q8VDP2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Q8VDP2 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Q8VDP2 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.52□□□□□ -0.41
Q8VDP2 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Q8VDP2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Q8VDP2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms