Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.17■□□□□ 0.02
Shtn1Q8K2Q9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Gm12058-201ENSMUST00000118614 437 ntBASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Gm37835-201ENSMUST00000193305 361 ntBASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Gm10109-202ENSMUST00000206890 1211 ntBASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shtn1Q8K2Q9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm12616-201ENSMUST00000118594 382 ntBASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm12624-201ENSMUST00000177615 382 ntBASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm12621-201ENSMUST00000177760 382 ntBASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm12615-201ENSMUST00000177970 382 ntBASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm12622-201ENSMUST00000177975 382 ntBASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm12627-201ENSMUST00000178412 382 ntBASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm12625-201ENSMUST00000179122 382 ntBASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm12614-201ENSMUST00000179586 382 ntBASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm12613-201ENSMUST00000180323 382 ntBASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 AC141438.2-201ENSMUST00000215068 271 ntBASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 AC135114.1-201ENSMUST00000228682 270 ntBASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shtn1Q8K2Q9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Shtn1Q8K2Q9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Shtn1Q8K2Q9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms