Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rfwd3Q8CIK8 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Gm15824-201ENSMUST00000119516 955 ntBASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Gm4271-201ENSMUST00000174444 973 ntBASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rfwd3Q8CIK8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Gm28693-202ENSMUST00000190758 331 ntBASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.12□□□□□ -0.47
Rfwd3Q8CIK8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rfwd3Q8CIK8 Gm13369-201ENSMUST00000119442 987 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms