Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc38Q8CDN8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Gm13612-201ENSMUST00000119276 390 ntBASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Gm8598-201ENSMUST00000221184 836 ntBASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc38Q8CDN8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ccdc38Q8CDN8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc38Q8CDN8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc38Q8CDN8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc38Q8CDN8 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.33□□□□□ -0.11
Ccdc38Q8CDN8 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.33□□□□□ -0.11
Ccdc38Q8CDN8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ccdc38Q8CDN8 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc38Q8CDN8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc38Q8CDN8 Gm7287-201ENSMUST00000205267 602 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms