Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trub1Q8C0D0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trub1Q8C0D0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trub1Q8C0D0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trub1Q8C0D0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trub1Q8C0D0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trub1Q8C0D0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trub1Q8C0D0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trub1Q8C0D0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trub1Q8C0D0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.27□□□□□ -0.28
Trub1Q8C0D0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trub1Q8C0D0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trub1Q8C0D0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trub1Q8C0D0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trub1Q8C0D0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Gm29649-201ENSMUST00000185649 419 ntBASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trub1Q8C0D0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Gm14921-201ENSMUST00000118643 908 ntBASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Gm11424-201ENSMUST00000121929 829 ntBASIC13.26□□□□□ -0.29
Trub1Q8C0D0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Gm7029-201ENSMUST00000173226 450 ntBASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Gm8099-201ENSMUST00000200510 742 ntBASIC13.26□□□□□ -0.29
Trub1Q8C0D0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trub1Q8C0D0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trub1Q8C0D0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms