Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm27149-201ENSMUST00000184716 1266 ntBASIC14.22□□□□□ -0.13
Trim35Q8C006 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim35Q8C006 Gm44333-201ENSMUST00000197168 107 ntBASIC14.22□□□□□ -0.13
Trim35Q8C006 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.22□□□□□ -0.13
Trim35Q8C006 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 AC144628.1-201ENSMUST00000227943 466 ntBASIC14.22□□□□□ -0.13
Trim35Q8C006 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim35Q8C006 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC14.22□□□□□ -0.13
Trim35Q8C006 Gm10145-201ENSMUST00000077776 462 ntBASIC14.22□□□□□ -0.13
Trim35Q8C006 Gm25475-201ENSMUST00000082825 180 ntBASIC14.22□□□□□ -0.13
Trim35Q8C006 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim35Q8C006 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trim35Q8C006 Gm10705-201ENSMUST00000098980 461 ntBASIC14.22□□□□□ -0.13
Trim35Q8C006 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim35Q8C006 Gm27013-202ENSMUST00000205067 1436 ntBASIC14.22□□□□□ -0.13
Trim35Q8C006 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim35Q8C006 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim35Q8C006 AC124426.1-203ENSMUST00000221814 1362 ntBASIC14.22□□□□□ -0.13
Trim35Q8C006 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim35Q8C006 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trim35Q8C006 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.21□□□□□ -0.13
Trim35Q8C006 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim35Q8C006 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim35Q8C006 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim35Q8C006 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.21□□□□□ -0.13
Trim35Q8C006 Gm8749-201ENSMUST00000117737 331 ntBASIC14.21□□□□□ -0.13
Trim35Q8C006 Gm13464-201ENSMUST00000119418 935 ntBASIC14.21□□□□□ -0.13
Trim35Q8C006 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim35Q8C006 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim35Q8C006 Gm22175-201ENSMUST00000175007 78 ntBASIC14.21□□□□□ -0.13
Trim35Q8C006 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 2900076A07Rik-203ENSMUST00000180879 725 ntTSL 3 BASIC14.21□□□□□ -0.13
Trim35Q8C006 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim35Q8C006 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.21□□□□□ -0.13
Trim35Q8C006 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC14.21□□□□□ -0.13
Trim35Q8C006 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim35Q8C006 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim35Q8C006 Gm43810-201ENSMUST00000201018 232 ntBASIC14.21□□□□□ -0.13
Trim35Q8C006 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.21□□□□□ -0.13
Trim35Q8C006 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Trim35Q8C006 AC117608.1-202ENSMUST00000224074 1049 ntBASIC14.21□□□□□ -0.13
Trim35Q8C006 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim35Q8C006 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trim35Q8C006 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim35Q8C006 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim35Q8C006 Gm43869-201ENSMUST00000204742 1405 ntBASIC14.21□□□□□ -0.13
Trim35Q8C006 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim35Q8C006 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trim35Q8C006 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim35Q8C006 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.21□□□□□ -0.14
Trim35Q8C006 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trim35Q8C006 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim35Q8C006 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim35Q8C006 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Gm13615-201ENSMUST00000120242 1612 ntBASIC14.2□□□□□ -0.14
Trim35Q8C006 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.2□□□□□ -0.14
Trim35Q8C006 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Gm26069-201ENSMUST00000157497 277 ntBASIC14.2□□□□□ -0.14
Trim35Q8C006 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim35Q8C006 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim35Q8C006 Sh2d1a-207ENSMUST00000189753 1223 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim35Q8C006 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms