Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp2bQ8BJF9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp2bQ8BJF9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2bQ8BJF9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Gm16215-201ENSMUST00000161990 637 ntBASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Gm6218-201ENSMUST00000219812 628 ntBASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2bQ8BJF9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms