Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc40Q8BI79 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Gm5687-201ENSMUST00000118252 640 ntBASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Gm6447-201ENSMUST00000118905 835 ntBASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Itm2b-204ENSMUST00000228637 783 ntBASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc40Q8BI79 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Gm18473-201ENSMUST00000220543 868 ntBASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc40Q8BI79 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms