Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim6Q8BGE7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.7□□□□□ -0.22
Trim6Q8BGE7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Gm29608-201ENSMUST00000190444 463 ntBASIC13.69□□□□□ -0.22
Trim6Q8BGE7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim6Q8BGE7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Gm11524-201ENSMUST00000119349 807 ntBASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Gm26464-201ENSMUST00000157094 305 ntBASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Gm5279-201ENSMUST00000199575 745 ntBASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Gm19078-201ENSMUST00000206311 727 ntBASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.68□□□□□ -0.22
Trim6Q8BGE7 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Daam2-202ENSMUST00000224595 1926 ntBASIC13.68□□□□□ -0.22
Trim6Q8BGE7 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim6Q8BGE7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.68□□□□□ -0.22
Trim6Q8BGE7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms