Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf40bQ80W14 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Gm12217-201ENSMUST00000118858 696 ntBASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Gm14726-201ENSMUST00000120623 896 ntBASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Prpf40bQ80W14 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Mir6927-201ENSMUST00000184494 71 ntBASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.87□□□□□ -0.03
Prpf40bQ80W14 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms