Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdh19Q80TF3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Pcdh19Q80TF3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
Pcdh19Q80TF3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdh19Q80TF3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Gm13492-201ENSMUST00000119772 665 ntBASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Mir8109-201ENSMUST00000184375 117 ntBASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Gm32025-201ENSMUST00000217960 307 ntBASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh19Q80TF3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Gm13297-201ENSMUST00000120205 934 ntBASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Gm2991-201ENSMUST00000173338 480 ntBASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Gm7783-201ENSMUST00000204795 781 ntBASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Cts7-204ENSMUST00000225321 1257 ntBASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh19Q80TF3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms