Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Gm37922-201ENSMUST00000195596 455 ntBASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Prpf38bQ80SY5 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Gm14028-201ENSMUST00000117434 479 ntBASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Gm3508-201ENSMUST00000186012 792 ntBASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Gm43058-201ENSMUST00000197645 625 ntBASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Prpf38bQ80SY5 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf38bQ80SY5 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Prpf38bQ80SY5 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf38bQ80SY5 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.52□□□□□ -0.24
Prpf38bQ80SY5 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Prpf38bQ80SY5 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf38bQ80SY5 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf38bQ80SY5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf38bQ80SY5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf38bQ80SY5 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf38bQ80SY5 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf38bQ80SY5 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Prpf38bQ80SY5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.52□□□□□ -0.25
Prpf38bQ80SY5 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms