Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.87□□□□□ -0.67
Rif1Q6PR54 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rif1Q6PR54 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Mir698-201ENSMUST00000102164 109 ntBASIC10.86□□□□□ -0.67
Rif1Q6PR54 Gm13736-201ENSMUST00000119272 253 ntBASIC10.86□□□□□ -0.67
Rif1Q6PR54 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.86□□□□□ -0.67
Rif1Q6PR54 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Gm17796-201ENSMUST00000189015 1213 ntBASIC10.86□□□□□ -0.67
Rif1Q6PR54 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Gm16202-201ENSMUST00000117532 544 ntBASIC10.86□□□□□ -0.67
Rif1Q6PR54 Gm24845-201ENSMUST00000158034 109 ntBASIC10.86□□□□□ -0.67
Rif1Q6PR54 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Gm43969-201ENSMUST00000204833 535 ntBASIC10.86□□□□□ -0.67
Rif1Q6PR54 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.86□□□□□ -0.67
Rif1Q6PR54 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC10.86□□□□□ -0.67
Rif1Q6PR54 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Rif1Q6PR54 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rif1Q6PR54 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.85□□□□□ -0.67
Rif1Q6PR54 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Gm20414-201ENSMUST00000172918 646 ntBASIC10.85□□□□□ -0.67
Rif1Q6PR54 Gm8756-201ENSMUST00000183250 929 ntBASIC10.85□□□□□ -0.67
Rif1Q6PR54 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.85□□□□□ -0.67
Rif1Q6PR54 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.85□□□□□ -0.67
Rif1Q6PR54 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rif1Q6PR54 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms