Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Gm27306-201ENSMUST00000183970 107 ntBASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Gm27702-201ENSMUST00000184512 56 ntBASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Gm29667-201ENSMUST00000190817 490 ntBASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Gm38223-201ENSMUST00000194484 695 ntBASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Scaf4Q6PFF0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scaf4Q6PFF0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Gm23935-201ENSMUST00000102303 57 ntBASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Gm24270-201ENSMUST00000102326 57 ntBASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.67□□□□□ -0.38
Scaf4Q6PFF0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms