Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rad54bQ6PFE3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Gm10576-201ENSMUST00000191927 825 ntBASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rad54bQ6PFE3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Gm19184-201ENSMUST00000196798 928 ntBASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rad54bQ6PFE3 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Gm11618-201ENSMUST00000117946 267 ntBASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Mir6392-201ENSMUST00000184924 108 ntBASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Gm8463-201ENSMUST00000208573 613 ntBASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rad54bQ6PFE3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms