Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rnf220Q6PDX6 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rnf220Q6PDX6 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Gm10253-201ENSMUST00000194270 940 ntBASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rnf220Q6PDX6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Gm24543-201ENSMUST00000103867 82 ntBASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Gm6916-202ENSMUST00000205523 195 ntBASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf220Q6PDX6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms