Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm15371-201ENSMUST00000117057 784 ntBASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Gm7730-201ENSMUST00000212486 454 ntBASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smarcd3Q6P9Z1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Gm42612-201ENSMUST00000197986 623 ntBASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Gm43170-201ENSMUST00000199827 612 ntBASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.8□□□□□ -0.52
Smarcd3Q6P9Z1 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms