Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Slx4Q6P1D7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Rn7s6-201ENSMUST00000175005 291 ntBASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Gm3671-201ENSMUST00000182463 1007 ntBASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Gm3332-201ENSMUST00000189337 928 ntBASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Gm44980-201ENSMUST00000205826 314 ntBASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 AC158355.1-201ENSMUST00000215895 1705 ntBASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Gm7049-201ENSMUST00000223520 1712 ntBASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slx4Q6P1D7 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Gm9358-201ENSMUST00000183067 927 ntBASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 AC124457.1-201ENSMUST00000198845 120 ntBASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Gm807-202ENSMUST00000224929 408 ntBASIC19.44■□□□□ 0.7
Slx4Q6P1D7 CT030637.1-201ENSMUST00000228016 669 ntBASIC19.44■□□□□ 0.7
Slx4Q6P1D7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Gm44851-201ENSMUST00000205735 2309 ntBASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 AC171241.1-201ENSMUST00000228144 1166 ntBASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slx4Q6P1D7 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Gm13809-201ENSMUST00000117921 597 ntBASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Gm11340-201ENSMUST00000119226 412 ntBASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 AC174797.2-202ENSMUST00000225729 568 ntBASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slx4Q6P1D7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms