Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.42□□□□□ -0.42
Sdc3Q64519 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sdc3Q64519 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.42□□□□□ -0.42
Sdc3Q64519 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sdc3Q64519 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sdc3Q64519 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sdc3Q64519 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.41□□□□□ -0.42
Sdc3Q64519 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.41□□□□□ -0.42
Sdc3Q64519 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sdc3Q64519 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.41□□□□□ -0.42
Sdc3Q64519 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Gm27514-201ENSMUST00000183692 110 ntBASIC12.41□□□□□ -0.42
Sdc3Q64519 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.41□□□□□ -0.42
Sdc3Q64519 Gm37008-201ENSMUST00000195712 319 ntBASIC12.41□□□□□ -0.42
Sdc3Q64519 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sdc3Q64519 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sdc3Q64519 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.41□□□□□ -0.42
Sdc3Q64519 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sdc3Q64519 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sdc3Q64519 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.4□□□□□ -0.42
Sdc3Q64519 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.4□□□□□ -0.42
Sdc3Q64519 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.4□□□□□ -0.42
Sdc3Q64519 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Sdc3Q64519 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.4□□□□□ -0.42
Sdc3Q64519 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sdc3Q64519 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.4□□□□□ -0.42
Sdc3Q64519 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.4□□□□□ -0.42
Sdc3Q64519 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.4□□□□□ -0.42
Sdc3Q64519 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sdc3Q64519 Mir6420-201ENSMUST00000185032 102 ntBASIC12.4□□□□□ -0.42
Sdc3Q64519 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.4□□□□□ -0.42
Sdc3Q64519 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.4□□□□□ -0.42
Sdc3Q64519 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.4□□□□□ -0.42
Sdc3Q64519 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.4□□□□□ -0.42
Sdc3Q64519 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sdc3Q64519 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sdc3Q64519 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sdc3Q64519 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sdc3Q64519 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.39□□□□□ -0.43
Sdc3Q64519 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.39□□□□□ -0.43
Sdc3Q64519 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sdc3Q64519 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms