Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC16.33■□□□□ 0.2
Clcn1Q64347 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC16.33■□□□□ 0.2
Clcn1Q64347 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC16.33■□□□□ 0.2
Clcn1Q64347 Gm38092-201ENSMUST00000195600 653 ntBASIC16.33■□□□□ 0.2
Clcn1Q64347 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.33■□□□□ 0.2
Clcn1Q64347 AC154634.3-201ENSMUST00000224589 736 ntBASIC16.33■□□□□ 0.2
Clcn1Q64347 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Clcn1Q64347 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Clcn1Q64347 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Clcn1Q64347 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clcn1Q64347 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.32■□□□□ 0.2
Clcn1Q64347 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Clcn1Q64347 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Clcn1Q64347 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC16.32■□□□□ 0.2
Clcn1Q64347 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Clcn1Q64347 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Clcn1Q64347 Gm12217-201ENSMUST00000118858 696 ntBASIC16.32■□□□□ 0.2
Clcn1Q64347 Gm14277-201ENSMUST00000121195 360 ntBASIC16.32■□□□□ 0.2
Clcn1Q64347 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC16.32■□□□□ 0.2
Clcn1Q64347 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Clcn1Q64347 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Clcn1Q64347 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC16.32■□□□□ 0.2
Clcn1Q64347 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Clcn1Q64347 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Gm22058-201ENSMUST00000083393 310 ntBASIC16.32■□□□□ 0.2
Clcn1Q64347 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Clcn1Q64347 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Clcn1Q64347 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Clcn1Q64347 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Gm27194-201ENSMUST00000175753 2936 ntBASIC16.32■□□□□ 0.2
Clcn1Q64347 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clcn1Q64347 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Clcn1Q64347 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Gm10728-201ENSMUST00000194292 1829 ntBASIC16.31■□□□□ 0.2
Clcn1Q64347 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Clcn1Q64347 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Clcn1Q64347 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Gm37737-201ENSMUST00000195013 1638 ntBASIC16.31■□□□□ 0.2
Clcn1Q64347 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Gm38355-201ENSMUST00000192514 1570 ntBASIC16.31■□□□□ 0.2
Clcn1Q64347 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.31■□□□□ 0.2
Clcn1Q64347 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC16.31■□□□□ 0.2
Clcn1Q64347 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Clcn1Q64347 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.31■□□□□ 0.2
Clcn1Q64347 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.31■□□□□ 0.2
Clcn1Q64347 Gm44262-201ENSMUST00000204969 372 ntBASIC16.31■□□□□ 0.2
Clcn1Q64347 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.31■□□□□ 0.2
Clcn1Q64347 Gm13097-201ENSMUST00000210722 397 ntBASIC16.31■□□□□ 0.2
Clcn1Q64347 Gm9004-201ENSMUST00000218739 1222 ntBASIC16.31■□□□□ 0.2
Clcn1Q64347 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn1Q64347 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms