Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Mir7076-201ENSMUST00000183519 74 ntBASIC14.86□□□□□ -0.03
Scn9aQ62205 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.86□□□□□ -0.03
Scn9aQ62205 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Scn9aQ62205 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Scn9aQ62205 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.86□□□□□ -0.03
Scn9aQ62205 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Scn9aQ62205 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Scn9aQ62205 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn9aQ62205 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Gm25880-201ENSMUST00000104331 132 ntBASIC14.85□□□□□ -0.03
Scn9aQ62205 Gm13809-201ENSMUST00000117921 597 ntBASIC14.85□□□□□ -0.03
Scn9aQ62205 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.85□□□□□ -0.03
Scn9aQ62205 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.85□□□□□ -0.03
Scn9aQ62205 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Gm23153-201ENSMUST00000175323 313 ntBASIC14.85□□□□□ -0.03
Scn9aQ62205 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.85□□□□□ -0.03
Scn9aQ62205 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.85□□□□□ -0.03
Scn9aQ62205 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Scn9aQ62205 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.85□□□□□ -0.03
Scn9aQ62205 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.85□□□□□ -0.03
Scn9aQ62205 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.85□□□□□ -0.03
Scn9aQ62205 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Scn9aQ62205 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Scn9aQ62205 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.85□□□□□ -0.03
Scn9aQ62205 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.85□□□□□ -0.03
Scn9aQ62205 Mir7677-201ENSMUST00000184226 67 ntBASIC14.85□□□□□ -0.03
Scn9aQ62205 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.85□□□□□ -0.03
Scn9aQ62205 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Scn9aQ62205 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Scn9aQ62205 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Scn9aQ62205 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn9aQ62205 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.84□□□□□ -0.03
Scn9aQ62205 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Scn9aQ62205 Gm2517-201ENSMUST00000215651 348 ntBASIC14.84□□□□□ -0.03
Scn9aQ62205 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Scn9aQ62205 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.84□□□□□ -0.03
Scn9aQ62205 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.84□□□□□ -0.03
Scn9aQ62205 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.84□□□□□ -0.03
Scn9aQ62205 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Scn9aQ62205 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn9aQ62205 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.84□□□□□ -0.03
Scn9aQ62205 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.84□□□□□ -0.03
Scn9aQ62205 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms