Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC11.76□□□□□ -0.53
VcanQ62059 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.76□□□□□ -0.53
VcanQ62059 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.76□□□□□ -0.53
VcanQ62059 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.76□□□□□ -0.53
VcanQ62059 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
VcanQ62059 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Gm13492-201ENSMUST00000119772 665 ntBASIC11.76□□□□□ -0.53
VcanQ62059 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC11.76□□□□□ -0.53
VcanQ62059 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.76□□□□□ -0.53
VcanQ62059 Gm3329-201ENSMUST00000159873 556 ntBASIC11.76□□□□□ -0.53
VcanQ62059 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
VcanQ62059 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
VcanQ62059 Gm23363-201ENSMUST00000175024 79 ntBASIC11.76□□□□□ -0.53
VcanQ62059 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
VcanQ62059 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.76□□□□□ -0.53
VcanQ62059 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
VcanQ62059 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.76□□□□□ -0.53
VcanQ62059 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
VcanQ62059 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VcanQ62059 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.75□□□□□ -0.53
VcanQ62059 Gm23596-201ENSMUST00000104304 132 ntBASIC11.75□□□□□ -0.53
VcanQ62059 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.75□□□□□ -0.53
VcanQ62059 Gm8199-201ENSMUST00000121323 823 ntBASIC11.75□□□□□ -0.53
VcanQ62059 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Gm20694-201ENSMUST00000176943 404 ntBASIC11.75□□□□□ -0.53
VcanQ62059 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
VcanQ62059 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.75□□□□□ -0.53
VcanQ62059 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
VcanQ62059 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
VcanQ62059 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.75□□□□□ -0.53
VcanQ62059 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.75□□□□□ -0.53
VcanQ62059 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
VcanQ62059 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.75□□□□□ -0.53
VcanQ62059 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.75□□□□□ -0.53
VcanQ62059 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
VcanQ62059 Gm11956-201ENSMUST00000119525 512 ntBASIC11.75□□□□□ -0.53
VcanQ62059 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.75□□□□□ -0.53
VcanQ62059 Gm9645-201ENSMUST00000197131 792 ntBASIC11.75□□□□□ -0.53
VcanQ62059 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
VcanQ62059 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.75□□□□□ -0.53
VcanQ62059 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
VcanQ62059 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.75□□□□□ -0.53
VcanQ62059 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Gm36982-201ENSMUST00000193796 1128 ntBASIC11.75□□□□□ -0.53
VcanQ62059 Gm6905-201ENSMUST00000205729 511 ntBASIC11.75□□□□□ -0.53
VcanQ62059 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.75□□□□□ -0.53
VcanQ62059 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.75□□□□□ -0.53
VcanQ62059 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
VcanQ62059 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VcanQ62059 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VcanQ62059 Gm15352-201ENSMUST00000118696 270 ntBASIC11.74□□□□□ -0.53
VcanQ62059 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.74□□□□□ -0.53
VcanQ62059 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.74□□□□□ -0.53
VcanQ62059 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VcanQ62059 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
VcanQ62059 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
VcanQ62059 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
VcanQ62059 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VcanQ62059 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
VcanQ62059 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms