Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Foxc1Q61572 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Foxc1Q61572 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Foxc1Q61572 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC9.69□□□□□ -0.86
Foxc1Q61572 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Foxc1Q61572 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Foxc1Q61572 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Foxc1Q61572 Gm15371-201ENSMUST00000117057 784 ntBASIC9.69□□□□□ -0.86
Foxc1Q61572 Gm11510-201ENSMUST00000120278 347 ntBASIC9.69□□□□□ -0.86
Foxc1Q61572 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC9.69□□□□□ -0.86
Foxc1Q61572 Gm12416-201ENSMUST00000120911 1008 ntBASIC9.69□□□□□ -0.86
Foxc1Q61572 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.69□□□□□ -0.86
Foxc1Q61572 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC9.69□□□□□ -0.86
Foxc1Q61572 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC9.69□□□□□ -0.86
Foxc1Q61572 Gm43830-201ENSMUST00000198760 1067 ntBASIC9.69□□□□□ -0.86
Foxc1Q61572 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Foxc1Q61572 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC9.69□□□□□ -0.86
Foxc1Q61572 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC9.69□□□□□ -0.86
Foxc1Q61572 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC9.69□□□□□ -0.86
Foxc1Q61572 AC164702.1-201ENSMUST00000220135 2212 ntBASIC9.69□□□□□ -0.86
Foxc1Q61572 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC9.69□□□□□ -0.86
Foxc1Q61572 AC156560.2-201ENSMUST00000221232 264 ntBASIC9.69□□□□□ -0.86
Foxc1Q61572 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Grk6-205ENSMUST00000224653 2976 ntBASIC9.69□□□□□ -0.86
Foxc1Q61572 AC125350.2-201ENSMUST00000224737 727 ntBASIC9.69□□□□□ -0.86
Foxc1Q61572 AC238811.3-201ENSMUST00000225422 709 ntBASIC9.69□□□□□ -0.86
Foxc1Q61572 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Foxc1Q61572 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Foxc1Q61572 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Foxc1Q61572 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Foxc1Q61572 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC9.68□□□□□ -0.86
Foxc1Q61572 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.68□□□□□ -0.86
Foxc1Q61572 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Foxc1Q61572 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm13033-201ENSMUST00000117591 1057 ntBASIC9.68□□□□□ -0.86
Foxc1Q61572 Gm5909-201ENSMUST00000119768 1281 ntBASIC9.68□□□□□ -0.86
Foxc1Q61572 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Foxc1Q61572 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Foxc1Q61572 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms