Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ecm1Q61508 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ecm1Q61508 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.17□□□□□ -0.14
Ecm1Q61508 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ecm1Q61508 Gm15703-201ENSMUST00000120250 880 ntBASIC14.17□□□□□ -0.14
Ecm1Q61508 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.17□□□□□ -0.14
Ecm1Q61508 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.17□□□□□ -0.14
Ecm1Q61508 Gm44100-201ENSMUST00000204329 436 ntBASIC14.17□□□□□ -0.14
Ecm1Q61508 Gm29787-201ENSMUST00000222129 849 ntBASIC14.17□□□□□ -0.14
Ecm1Q61508 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.17□□□□□ -0.14
Ecm1Q61508 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.17□□□□□ -0.14
Ecm1Q61508 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Ecm1Q61508 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ecm1Q61508 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.17□□□□□ -0.14
Ecm1Q61508 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ecm1Q61508 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Ecm1Q61508 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Ecm1Q61508 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ecm1Q61508 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.16□□□□□ -0.14
Ecm1Q61508 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ecm1Q61508 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ecm1Q61508 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Ecm1Q61508 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ecm1Q61508 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Ecm1Q61508 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.16□□□□□ -0.14
Ecm1Q61508 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 AU022133-201ENSMUST00000200601 873 ntBASIC14.16□□□□□ -0.14
Ecm1Q61508 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.16□□□□□ -0.14
Ecm1Q61508 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ecm1Q61508 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ecm1Q61508 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ecm1Q61508 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ecm1Q61508 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ecm1Q61508 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Ecm1Q61508 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.15□□□□□ -0.14
Ecm1Q61508 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.15□□□□□ -0.14
Ecm1Q61508 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.15□□□□□ -0.14
Ecm1Q61508 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Ecm1Q61508 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.15□□□□□ -0.14
Ecm1Q61508 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.15□□□□□ -0.14
Ecm1Q61508 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.15□□□□□ -0.14
Ecm1Q61508 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.15□□□□□ -0.14
Ecm1Q61508 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.15□□□□□ -0.14
Ecm1Q61508 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.15□□□□□ -0.14
Ecm1Q61508 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Gm42937-201ENSMUST00000197360 752 ntBASIC14.15□□□□□ -0.14
Ecm1Q61508 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.15□□□□□ -0.14
Ecm1Q61508 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.15□□□□□ -0.14
Ecm1Q61508 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ecm1Q61508 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.15□□□□□ -0.14
Ecm1Q61508 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms