Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.1□□□□□ -0.15
Col11a1Q61245 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Col11a1Q61245 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.1□□□□□ -0.15
Col11a1Q61245 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col11a1Q61245 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Col11a1Q61245 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Col11a1Q61245 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.1□□□□□ -0.15
Col11a1Q61245 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC14.1□□□□□ -0.15
Col11a1Q61245 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Col11a1Q61245 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.1□□□□□ -0.15
Col11a1Q61245 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.1□□□□□ -0.15
Col11a1Q61245 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.1□□□□□ -0.15
Col11a1Q61245 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Col11a1Q61245 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col11a1Q61245 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col11a1Q61245 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col11a1Q61245 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.09□□□□□ -0.15
Col11a1Q61245 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.09□□□□□ -0.15
Col11a1Q61245 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.09□□□□□ -0.15
Col11a1Q61245 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Col11a1Q61245 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC14.09□□□□□ -0.15
Col11a1Q61245 Gm11511-201ENSMUST00000118146 540 ntBASIC14.09□□□□□ -0.15
Col11a1Q61245 Mir6998-201ENSMUST00000183343 64 ntBASIC14.09□□□□□ -0.15
Col11a1Q61245 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.09□□□□□ -0.15
Col11a1Q61245 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.09□□□□□ -0.15
Col11a1Q61245 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Col11a1Q61245 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.09□□□□□ -0.15
Col11a1Q61245 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Col11a1Q61245 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Col11a1Q61245 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Col11a1Q61245 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Col11a1Q61245 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col11a1Q61245 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col11a1Q61245 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col11a1Q61245 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.08□□□□□ -0.15
Col11a1Q61245 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col11a1Q61245 Gm15744-201ENSMUST00000161734 213 ntBASIC14.08□□□□□ -0.15
Col11a1Q61245 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.08□□□□□ -0.15
Col11a1Q61245 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
Col11a1Q61245 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col11a1Q61245 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col11a1Q61245 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.08□□□□□ -0.15
Col11a1Q61245 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Col11a1Q61245 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col11a1Q61245 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.08□□□□□ -0.15
Col11a1Q61245 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col11a1Q61245 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Col11a1Q61245 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Col11a1Q61245 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col11a1Q61245 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.08□□□□□ -0.16
Col11a1Q61245 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Gm13263-201ENSMUST00000121271 838 ntBASIC14.08□□□□□ -0.16
Col11a1Q61245 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.08□□□□□ -0.16
Col11a1Q61245 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14.08□□□□□ -0.16
Col11a1Q61245 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Col11a1Q61245 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col11a1Q61245 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms