Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Col12a1Q60847 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col12a1Q60847 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Gm11509-201ENSMUST00000117358 325 ntBASIC12.38□□□□□ -0.43
Col12a1Q60847 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.38□□□□□ -0.43
Col12a1Q60847 Gm13019-201ENSMUST00000120000 276 ntBASIC12.38□□□□□ -0.43
Col12a1Q60847 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Col12a1Q60847 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Col12a1Q60847 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Col12a1Q60847 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col12a1Q60847 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.37□□□□□ -0.43
Col12a1Q60847 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.37□□□□□ -0.43
Col12a1Q60847 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col12a1Q60847 Gm25076-201ENSMUST00000104098 132 ntBASIC12.37□□□□□ -0.43
Col12a1Q60847 Gm13916-201ENSMUST00000117368 628 ntBASIC12.37□□□□□ -0.43
Col12a1Q60847 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Gm9507-202ENSMUST00000180157 654 ntBASIC12.37□□□□□ -0.43
Col12a1Q60847 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.37□□□□□ -0.43
Col12a1Q60847 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.37□□□□□ -0.43
Col12a1Q60847 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col12a1Q60847 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.37□□□□□ -0.43
Col12a1Q60847 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col12a1Q60847 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Col12a1Q60847 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col12a1Q60847 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.36□□□□□ -0.43
Col12a1Q60847 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.36□□□□□ -0.43
Col12a1Q60847 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.36□□□□□ -0.43
Col12a1Q60847 Gm23085-201ENSMUST00000157849 293 ntBASIC12.36□□□□□ -0.43
Col12a1Q60847 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.36□□□□□ -0.43
Col12a1Q60847 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Gm4604-201ENSMUST00000025040 390 ntBASIC12.36□□□□□ -0.43
Col12a1Q60847 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.36□□□□□ -0.43
Col12a1Q60847 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.36□□□□□ -0.43
Col12a1Q60847 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col12a1Q60847 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Col12a1Q60847 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Col12a1Q60847 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Col12a1Q60847 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.36□□□□□ -0.43
Col12a1Q60847 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.36□□□□□ -0.43
Col12a1Q60847 Gm35713-201ENSMUST00000210516 199 ntBASIC12.36□□□□□ -0.43
Col12a1Q60847 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.36□□□□□ -0.43
Col12a1Q60847 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col12a1Q60847 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col12a1Q60847 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col12a1Q60847 Gm11949-201ENSMUST00000117640 372 ntBASIC12.35□□□□□ -0.43
Col12a1Q60847 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms