Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NfkbibQ60778 Gm24255-201ENSMUST00000104481 128 ntBASIC15.43■□□□□ 0.06
NfkbibQ60778 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.43■□□□□ 0.06
NfkbibQ60778 Gm2546-201ENSMUST00000182630 991 ntBASIC15.43■□□□□ 0.06
NfkbibQ60778 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.43■□□□□ 0.06
NfkbibQ60778 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.43■□□□□ 0.06
NfkbibQ60778 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NfkbibQ60778 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NfkbibQ60778 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NfkbibQ60778 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.43■□□□□ 0.06
NfkbibQ60778 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NfkbibQ60778 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.43■□□□□ 0.06
NfkbibQ60778 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NfkbibQ60778 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NfkbibQ60778 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NfkbibQ60778 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NfkbibQ60778 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NfkbibQ60778 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
NfkbibQ60778 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
NfkbibQ60778 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.43■□□□□ 0.06
NfkbibQ60778 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.43■□□□□ 0.06
NfkbibQ60778 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NfkbibQ60778 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NfkbibQ60778 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
NfkbibQ60778 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NfkbibQ60778 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.43■□□□□ 0.06
NfkbibQ60778 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.42■□□□□ 0.06
NfkbibQ60778 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NfkbibQ60778 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.42■□□□□ 0.06
NfkbibQ60778 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NfkbibQ60778 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Gm11531-201ENSMUST00000117614 555 ntBASIC15.42■□□□□ 0.06
NfkbibQ60778 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.42■□□□□ 0.06
NfkbibQ60778 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Gm7584-201ENSMUST00000175829 940 ntBASIC15.42■□□□□ 0.06
NfkbibQ60778 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.42■□□□□ 0.06
NfkbibQ60778 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.42■□□□□ 0.06
NfkbibQ60778 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.42■□□□□ 0.06
NfkbibQ60778 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NfkbibQ60778 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.42■□□□□ 0.06
NfkbibQ60778 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.42■□□□□ 0.06
NfkbibQ60778 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NfkbibQ60778 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.41■□□□□ 0.06
NfkbibQ60778 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.41■□□□□ 0.06
NfkbibQ60778 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.41■□□□□ 0.06
NfkbibQ60778 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
NfkbibQ60778 Gm37259-201ENSMUST00000193903 849 ntBASIC15.41■□□□□ 0.06
NfkbibQ60778 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NfkbibQ60778 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NfkbibQ60778 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NfkbibQ60778 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NfkbibQ60778 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NfkbibQ60778 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NfkbibQ60778 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NfkbibQ60778 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NfkbibQ60778 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NfkbibQ60778 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NfkbibQ60778 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NfkbibQ60778 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NfkbibQ60778 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NfkbibQ60778 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NfkbibQ60778 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NfkbibQ60778 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NfkbibQ60778 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.4■□□□□ 0.06
NfkbibQ60778 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NfkbibQ60778 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms