Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Gm4732-201ENSMUST00000118778 473 ntBASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Gm14005-208ENSMUST00000223654 681 ntBASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tsr1Q5SWD9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Gm4804-201ENSMUST00000182234 999 ntBASIC14□□□□□ -0.17
Tsr1Q5SWD9 Gm9522-201ENSMUST00000182394 926 ntBASIC14□□□□□ -0.17
Tsr1Q5SWD9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Gm44855-201ENSMUST00000205725 362 ntBASIC14□□□□□ -0.17
Tsr1Q5SWD9 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Gm5425-201ENSMUST00000214125 459 ntBASIC14□□□□□ -0.17
Tsr1Q5SWD9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Gm44292-201ENSMUST00000205194 2364 ntBASIC14□□□□□ -0.17
Tsr1Q5SWD9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tsr1Q5SWD9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Gm7488-201ENSMUST00000117148 684 ntBASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Gm15968-201ENSMUST00000119342 1168 ntBASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Gm8190-201ENSMUST00000199603 586 ntBASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Gm2423-201ENSMUST00000074863 733 ntBASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tsr1Q5SWD9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms