Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav5d-4Q5R1F6 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Mir686-201ENSMUST00000102174 109 ntBASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav5d-4Q5R1F6 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Gm11618-201ENSMUST00000117946 267 ntBASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Proscos-202ENSMUST00000178990 666 ntBASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Gm28693-202ENSMUST00000190758 331 ntBASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5d-4Q5R1F6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms