Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Gm1401-201ENSMUST00000122048 772 ntBASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Gm11025-201ENSMUST00000140773 466 ntBASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Mir3113-201ENSMUST00000175478 76 ntBASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Gpr146-202ENSMUST00000053120 1040 ntBASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3-3Q5R1C3 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3-3Q5R1C3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3-3Q5R1C3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3-3Q5R1C3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3-3Q5R1C3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC9.65□□□□□ -0.87
Trav3-3Q5R1C3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3-3Q5R1C3 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3-3Q5R1C3 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.65□□□□□ -0.87
Trav3-3Q5R1C3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Gm6756-201ENSMUST00000180647 1620 ntBASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Gm2810-201ENSMUST00000118681 990 ntBASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Gm38225-201ENSMUST00000194001 393 ntBASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Gm44492-201ENSMUST00000197012 141 ntBASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Gm35960-201ENSMUST00000202712 767 ntBASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Gm18057-201ENSMUST00000208220 503 ntBASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Gm45612-201ENSMUST00000211320 160 ntBASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC9.64□□□□□ -0.87
Trav3-3Q5R1C3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms