Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.86□□□□□ -0.51
Urb1Q571H0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.86□□□□□ -0.51
Urb1Q571H0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Urb1Q571H0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.86□□□□□ -0.51
Urb1Q571H0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
Urb1Q571H0 Gm8566-201ENSMUST00000120174 465 ntBASIC11.86□□□□□ -0.51
Urb1Q571H0 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.86□□□□□ -0.51
Urb1Q571H0 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.86□□□□□ -0.51
Urb1Q571H0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.86□□□□□ -0.51
Urb1Q571H0 Gm45118-201ENSMUST00000208928 825 ntBASIC11.86□□□□□ -0.51
Urb1Q571H0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Urb1Q571H0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.86□□□□□ -0.51
Urb1Q571H0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Urb1Q571H0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Urb1Q571H0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Urb1Q571H0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Gm25700-201ENSMUST00000177693 110 ntBASIC11.85□□□□□ -0.51
Urb1Q571H0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.85□□□□□ -0.51
Urb1Q571H0 Gm44100-201ENSMUST00000204329 436 ntBASIC11.85□□□□□ -0.51
Urb1Q571H0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.85□□□□□ -0.51
Urb1Q571H0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Urb1Q571H0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Urb1Q571H0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.85□□□□□ -0.51
Urb1Q571H0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.85□□□□□ -0.51
Urb1Q571H0 Gm11531-201ENSMUST00000117614 555 ntBASIC11.85□□□□□ -0.51
Urb1Q571H0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.85□□□□□ -0.51
Urb1Q571H0 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.85□□□□□ -0.51
Urb1Q571H0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Urb1Q571H0 Daam2-202ENSMUST00000224595 1926 ntBASIC11.85□□□□□ -0.51
Urb1Q571H0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Urb1Q571H0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Urb1Q571H0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Urb1Q571H0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Urb1Q571H0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Urb1Q571H0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.84□□□□□ -0.51
Urb1Q571H0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.84□□□□□ -0.51
Urb1Q571H0 Gm5051-201ENSMUST00000204085 485 ntBASIC11.84□□□□□ -0.51
Urb1Q571H0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Urb1Q571H0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms