Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Gm7809-201ENSMUST00000153199 742 ntBASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Gm3890-201ENSMUST00000182416 207 ntBASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Gm18062-201ENSMUST00000208020 547 ntBASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Gm18055-201ENSMUST00000208254 547 ntBASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ckap2Q3V1H1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Gm24548-201ENSMUST00000158650 108 ntBASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ckap2Q3V1H1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Gm13492-201ENSMUST00000119772 665 ntBASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Gm11964-201ENSMUST00000120982 444 ntBASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Mir7085-201ENSMUST00000184353 66 ntBASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Gm26035-201ENSMUST00000083065 308 ntBASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ckap2Q3V1H1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms