Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.15□□□□□ -0.14
Bbof1Q3V079 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Bbof1Q3V079 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.15□□□□□ -0.14
Bbof1Q3V079 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.15□□□□□ -0.14
Bbof1Q3V079 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.15□□□□□ -0.14
Bbof1Q3V079 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.15□□□□□ -0.14
Bbof1Q3V079 Gm43433-201ENSMUST00000196573 481 ntBASIC14.15□□□□□ -0.14
Bbof1Q3V079 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.15□□□□□ -0.14
Bbof1Q3V079 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.15□□□□□ -0.14
Bbof1Q3V079 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.15□□□□□ -0.14
Bbof1Q3V079 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bbof1Q3V079 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.15□□□□□ -0.14
Bbof1Q3V079 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Bbof1Q3V079 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Bbof1Q3V079 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bbof1Q3V079 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.15□□□□□ -0.14
Bbof1Q3V079 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bbof1Q3V079 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bbof1Q3V079 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bbof1Q3V079 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.14□□□□□ -0.15
Bbof1Q3V079 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Mir874-201ENSMUST00000104769 76 ntBASIC14.14□□□□□ -0.15
Bbof1Q3V079 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.14□□□□□ -0.15
Bbof1Q3V079 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.14□□□□□ -0.15
Bbof1Q3V079 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.14□□□□□ -0.15
Bbof1Q3V079 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.14□□□□□ -0.15
Bbof1Q3V079 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.14□□□□□ -0.15
Bbof1Q3V079 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bbof1Q3V079 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Bbof1Q3V079 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.13□□□□□ -0.15
Bbof1Q3V079 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.13□□□□□ -0.15
Bbof1Q3V079 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.13□□□□□ -0.15
Bbof1Q3V079 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Bbof1Q3V079 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.13□□□□□ -0.15
Bbof1Q3V079 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bbof1Q3V079 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bbof1Q3V079 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bbof1Q3V079 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bbof1Q3V079 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bbof1Q3V079 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bbof1Q3V079 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Bbof1Q3V079 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms