Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Gm8396-201ENSMUST00000057361 823 ntBASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim40Q3UWA4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Gm14767-201ENSMUST00000121559 586 ntBASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Gm44344-201ENSMUST00000200287 129 ntBASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim40Q3UWA4 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.06□□□□□ -0.48
Trim40Q3UWA4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim40Q3UWA4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim40Q3UWA4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim40Q3UWA4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim40Q3UWA4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Trim40Q3UWA4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim40Q3UWA4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim40Q3UWA4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim40Q3UWA4 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.06□□□□□ -0.48
Trim40Q3UWA4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim40Q3UWA4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Trim40Q3UWA4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms