Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Gm27680-201ENSMUST00000184192 160 ntBASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Gm27321-201ENSMUST00000185021 205 ntBASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.06□□□□□ -0.32
Cnga4Q3UW12 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Gm14767-201ENSMUST00000121559 586 ntBASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cnga4Q3UW12 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Gm27525-201ENSMUST00000184465 107 ntBASIC13.04□□□□□ -0.32
Cnga4Q3UW12 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.04□□□□□ -0.32
Cnga4Q3UW12 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.03□□□□□ -0.32
Cnga4Q3UW12 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cnga4Q3UW12 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cnga4Q3UW12 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms