Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nlrc4Q3UP24 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Gm13813-201ENSMUST00000120998 787 ntBASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Gm3890-201ENSMUST00000182416 207 ntBASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Gm37008-201ENSMUST00000195712 319 ntBASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nlrc4Q3UP24 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Gm23363-201ENSMUST00000175024 79 ntBASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Gm19184-201ENSMUST00000196798 928 ntBASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Gm19309-201ENSMUST00000218295 205 ntBASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nlrc4Q3UP24 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Nlrc4Q3UP24 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms